Creating reference gene annotation for the mouse C57BL6/J genome assembly

GENCODE : The reference human genome annotation for The

GENCODE: the reference human genome annotation for The ENCODE Project.

The GENCODE Consortium aims to identify all gene features in the human genome using a combination of computational analysis, manual annotation, and experimental validation. Since the first public release of this annotation data set, few new protein-coding loci have been added, yet the number of alternative splicing transcripts annotated has steadily increased. The GENCODE 7 release contains 20,...

A new version of the grapevine reference genome assembly (12X.v2) and of its annotation (VCost.v3)

a UMR GV, INRA, UEVE, ERL CNRS, 2 rue Gaston Crémieux, 91000 Evry, France b EPGV US 1279, INRA, CEA, IG-CNG, Université Paris-Saclay, 91000 Evry, France c Instituto de Ciencias de la Vid y del Vino (CSIC, Universidad de La Rioja, Gobierno de La Rioja), Logroño 26007, Spain d IGA, via J. Linussio 51, 33100 Udine, Italy e SVQV, UMR 1131, INRA, Université de Strasbourg, 28 rue de Herrlisheim, 6800...

The Gene Ontology's Reference Genome Project: A Unified Framework for Functional Annotation across Species

The Gene Ontology (GO) is a collaborative effort that provides structured vocabularies for annotating the molecular function, biological role, and cellular location of gene products in a highly systematic way and in a species-neutral manner with the aim of unifying the representation of gene function across different organisms. Each contributing member of the GO Consortium independently associa...

The TIGR rice genome annotation resource: annotating the rice genome and creating resources for plant biologists

Rice is not only a major food staple for the world's population but it also is a model species for a major group of flowering plants, the monocotyledonous plants. Draft genomic sequence of two subspecies of rice, Oryza sativa spp. japonica and indica ssp. are publicly available. To provide the community with a resource to data-mine the rice genome, we have constructed an annotation resource for...